WormBase Tree Display for CDS: PPA12335

PPA12335 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 74
      122 230
      400 498
      630 748
      894 978
      1508 1617
      2270 2328
      2753 2848
      3289 3362
      3535 3615
  DB_info: Database: pristionchus.org cds gene-UMM-S2844-44.52
      TREEFAM TREEFAM_ID TF314145
    DB_remark: PPA-OTUB-1 protein; contains similarity to Pfam domain PF10275 (Peptidase C65 Otubain); contains similarity to Interpro domains IPR016615 (Ubiquitin thioesterase Otubain), IPR038765 (Papain-like cysteine peptidase superfamily), IPR042468 (Peptidase C65, otubain, subdomain 1), IPR019400 (Peptidase C65, otubain), IPR042467 (Peptidase C65, otubain, subdomain 2)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00101889
    Corresponding_transcript: PPA12335.1
    Corresponding_protein: PP71272
    Corresponding_oligo_set: GPL14372_Probes_91271
    Microarray_results: GPL14372_Probes_91271
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2844-44.52 Curator_confirmed: WBPerson4055
  Method: curated