WormBase Tree Display for CDS: PPA12342
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PPA12342 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S2844-44.28 | ||
DB_remark | PPA-MUT-2 protein; contains similarity to Pfam domain PF03828 (Cid1 family poly A polymerase); contains similarity to Interpro domains IPR043519 (Nucleotidyltransferase superfamily), IPR002058 (PAP/25A-associated) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00101896 | ||||
Corresponding_transcript | PPA12342.1 | |||||
Corresponding_protein | PP64828 | |||||
Corresponding_oligo_set | GPL14372_Probes_91226 | |||||
GPL14372_Probes_91227 | ||||||
GPL14372_Probes_91228 | ||||||
Microarray_results | GPL14372_Probes_91226 | |||||
GPL14372_Probes_91227 | ||||||
GPL14372_Probes_91228 | ||||||
RNASeq_FPKM | WBls:0000032 | 5.64431 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.33318 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S2844-44.28 | Curator_confirmed | WBPerson4055 | |||
Method | curated |