WormBase Tree Display for CDS: PPA12442
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PPA12442 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-44.12 | ||
DB_remark | PPA-GLRX-3 protein; contains similarity to Pfam domains PF00085 (Thioredoxin), PF00462 (Glutaredoxin); contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR013766 (Thioredoxin domain), IPR004480 (Monothiol glutaredoxin-related), IPR036249 (Thioredoxin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00101996 | ||||
Corresponding_transcript | PPA12442.1 | |||||
Corresponding_protein | PP53194 | |||||
Corresponding_oligo_set | GPL14372_Probes_56188 | |||||
GPL14372_Probes_56190 | ||||||
GPL14372_Probes_56192 | ||||||
GPL14372_Probes_56193 | ||||||
Microarray_results | GPL14372_Probes_56188 | |||||
GPL14372_Probes_56190 | ||||||
GPL14372_Probes_56192 | ||||||
GPL14372_Probes_56193 | ||||||
RNASeq_FPKM | WBls:0000032 | 15.447 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 40.1379 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-44.12 | Curator_confirmed | WBPerson4055 | |||
Method | curated |