WormBase Tree Display for CDS: PPA12444
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PPA12444 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 103 | |||
258 | 366 | |||||
584 | 673 | |||||
806 | 902 | |||||
1159 | 1242 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-44.30 | ||
DB_remark | contains similarity to Pfam domain PF10260 (Uncharacterized conserved domain (SAYSvFN)); contains similarity to Interpro domains IPR039159 (SAYSvFN domain-containing protein 1), IPR019387 (SAYSvFN domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00101998 | ||||
Corresponding_transcript | PPA12444.1 | |||||
Corresponding_protein | PP63631 | |||||
Corresponding_oligo_set | GPL14372_Probes_56195 | |||||
GPL14372_Probes_56196 | ||||||
Microarray_results | GPL14372_Probes_56195 | |||||
GPL14372_Probes_56196 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-44.30 | Curator_confirmed | WBPerson4055 | |||
Method | curated |