WormBase Tree Display for CDS: PPA12479
expand all nodes | collapse all nodes | view schema
PPA12479 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 82 | |||
145 | 237 | |||||
370 | 447 | |||||
490 | 509 | |||||
640 | 712 | |||||
806 | 918 | |||||
1101 | 1241 | |||||
1283 | 1386 | |||||
1451 | 1583 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-43.63 | ||
DB_remark | PPA-CYP-33C9 protein; contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102033 | ||||
Corresponding_transcript | PPA12479.1 | |||||
Corresponding_protein | PP61327 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-43.63 | Curator_confirmed | WBPerson4055 | |||
Method | curated |