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WormBase Tree Display for CDS: PPA12504

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Name Class

PPA12504SMapS_parentSequencePPA_ChrI
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-41.32
TREEFAMTREEFAM_IDTF318036
DB_remarkPPA-ZTF-7 protein; contains similarity to Pfam domain PF12756 (C2H2 type zinc-finger (2 copies)); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR041661 (ZN622/Rei1/Reh1, zinc finger C2H2-type), IPR013087 (Zinc finger C2H2-type), IPR040048 (Zinc finger protein 277)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00102058
Corresponding_transcriptPPA12504.1
Corresponding_proteinPP59127
Corresponding_oligo_setGPL14372_Probes_10380
GPL14372_Probes_10381
GPL14372_Probes_10382
GPL14372_Probes_10383
GPL14372_Probes_10384
Microarray_resultsGPL14372_Probes_10380
GPL14372_Probes_10381
GPL14372_Probes_10382
GPL14372_Probes_10383
GPL14372_Probes_10384
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-41.32Curator_confirmedWBPerson4055
Methodcurated