WormBase Tree Display for CDS: PPA12519
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| PPA12519 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (32) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMA-S71-41.81 | ||
| TREEFAM | TREEFAM_ID | TF315298 | ||||
| DB_remark | contains similarity to Pfam domain PF01764 (Lipase (class 3)); contains similarity to Interpro domains IPR002921 (Fungal lipase-like domain), IPR029058 (Alpha/Beta hydrolase fold) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00102073 | ||||
| Corresponding_transcript | PPA12519.1 | |||||
| Corresponding_protein | PP73447 | |||||
| Corresponding_oligo_set (13) | ||||||
| Microarray_results (13) | ||||||
| RNASeq_FPKM | WBls:0000032 | 11.0422 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 48.4368 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMA-S71-41.81 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
