WormBase Tree Display for CDS: PPA12523
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PPA12523 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 81 | |||
264 | 413 | |||||
508 | 621 | |||||
668 | 754 | |||||
806 | 901 | |||||
958 | 1080 | |||||
1172 | 1370 | |||||
1467 | 1582 | |||||
1710 | 1814 | |||||
1952 | 2071 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-41.3 | ||
DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102077 | ||||
Corresponding_transcript | PPA12523.1 | |||||
Corresponding_protein | PP71329 | |||||
Corresponding_oligo_set | GPL14372_Probes_10443 | |||||
GPL14372_Probes_10444 | ||||||
GPL14372_Probes_10445 | ||||||
GPL14372_Probes_10446 | ||||||
GPL14372_Probes_10447 | ||||||
Microarray_results | GPL14372_Probes_10443 | |||||
GPL14372_Probes_10444 | ||||||
GPL14372_Probes_10445 | ||||||
GPL14372_Probes_10446 | ||||||
GPL14372_Probes_10447 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-41.3 | Curator_confirmed | WBPerson4055 | |||
Method | curated |