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WormBase Tree Display for CDS: PPA12533

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Name Class

PPA12533SMapS_parentSequencePPA_ChrI
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S71-41.68
DB_remarkcontains similarity to Pfam domain PF05485 (THAP domain); contains similarity to Interpro domains IPR038441 (THAP-type zinc finger superfamily), IPR006612 (THAP-type zinc finger)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00102087
Corresponding_transcriptPPA12533.1
Corresponding_proteinPP53912
Corresponding_oligo_setGPL14372_Probes_10476
GPL14372_Probes_10477
GPL14372_Probes_10478
GPL14372_Probes_10479
GPL14372_Probes_10480
Microarray_resultsGPL14372_Probes_10476
GPL14372_Probes_10477
GPL14372_Probes_10478
GPL14372_Probes_10479
GPL14372_Probes_10480
RNASeq_FPKMWBls:00000328.53784From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010132.266From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S71-41.68Curator_confirmedWBPerson4055
Methodcurated