WormBase Tree Display for CDS: PPA12544
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PPA12544 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-39.69 | ||
TREEFAM | TREEFAM_ID | TF317075 | ||||
DB_remark | PPA-IFBP-1 protein; contains similarity to Pfam domain PF11261 (Interferon regulatory factor 2-binding protein zinc finger); contains similarity to Interpro domain IPR022750 (Interferon regulatory factor 2-binding protein 1 & 2, zinc finger) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102098 | ||||
Corresponding_transcript | PPA12544.1 | |||||
Corresponding_protein | PP67575 | |||||
Corresponding_oligo_set | GPL14372_Probes_10525 | |||||
GPL14372_Probes_10526 | ||||||
GPL14372_Probes_10527 | ||||||
GPL14372_Probes_10528 | ||||||
GPL14372_Probes_10529 | ||||||
Microarray_results | GPL14372_Probes_10525 | |||||
GPL14372_Probes_10526 | ||||||
GPL14372_Probes_10527 | ||||||
GPL14372_Probes_10528 | ||||||
GPL14372_Probes_10529 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.15975 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-39.69 | Curator_confirmed | WBPerson4055 | |||
Method | curated |