WormBase Tree Display for CDS: PPA12550
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PPA12550 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (31) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-39.76 | ||
DB_remark | PPA-SULP-8 protein; contains similarity to Pfam domains PF00916 (Sulfate permease family), PF01740 (STAS domain); contains similarity to Interpro domains IPR002645 (STAS domain), IPR001902 (SLC26A/SulP transporter), IPR036513 (STAS domain superfamily), IPR011547 (SLC26A/SulP transporter domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102104 | ||||
Corresponding_transcript | PPA12550.1 | |||||
Corresponding_protein | PP51272 | |||||
Corresponding_oligo_set | GPL14372_Probes_10548 | |||||
GPL14372_Probes_10549 | ||||||
GPL14372_Probes_10552 | ||||||
GPL14372_Probes_10553 | ||||||
Microarray_results | GPL14372_Probes_10548 | |||||
GPL14372_Probes_10549 | ||||||
GPL14372_Probes_10552 | ||||||
GPL14372_Probes_10553 | ||||||
RNASeq_FPKM | WBls:0000032 | 1.29322 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.52725 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-39.76 | Curator_confirmed | WBPerson4055 | |||
Method | curated |