WormBase Tree Display for CDS: PPA12642

PPA12642 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (21)
  DB_info: Database: pristionchus.org cds gene-UMM-S71-35.21
    DB_remark: contains similarity to Pfam domain PF02886 (LBP / BPI / CETP family, C-terminal domain); contains similarity to Interpro domains IPR017942 (Lipid-binding serum glycoprotein, N-terminal), IPR001124 (Lipid-binding serum glycoprotein, C-terminal), IPR032942 (BPI/LBP/Plunc family), IPR017943 (Bactericidal permeability-increasing protein, alpha/beta domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00102196
    Corresponding_transcript: PPA12642.1
    Corresponding_protein: PP52549
    Corresponding_oligo_set: GPL14372_Probes_10831
      GPL14372_Probes_10832
      GPL14372_Probes_10833
      GPL14372_Probes_10834
      GPL14372_Probes_10835
    Microarray_results: GPL14372_Probes_10831
      GPL14372_Probes_10832
      GPL14372_Probes_10833
      GPL14372_Probes_10834
      GPL14372_Probes_10835
    RNASeq_FPKM: WBls:0000032 32.8183 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 4.3065 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S71-35.21 Curator_confirmed: WBPerson4055
  Method: curated