WormBase Tree Display for CDS: PPA12643
expand all nodes | collapse all nodes | view schema
| PPA12643 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (36) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S71-35.20 | ||
| DB_remark | contains similarity to Pfam domain PF01663 (Type I phosphodiesterase / nucleotide pyrophosphatase); contains similarity to Interpro domains IPR002591 (Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase), IPR017850 (Alkaline-phosphatase-like, core domain superfamily) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00102197 | ||||
| Corresponding_transcript | PPA12643.1 | |||||
| Corresponding_protein | PP72784 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S71-35.20 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
