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WormBase Tree Display for CDS: PPA12810

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Name Class

PPA12810SMapS_parentSequencePPA_ChrII
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S421-2.159
DB_remarkPPA-DIE-1 protein; contains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type), PF12874 (Zinc-finger of C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00102364
Corresponding_transcriptPPA12810.1
Corresponding_proteinPP57655
Corresponding_oligo_setGPL14372_Probes_64733
GPL14372_Probes_64734
GPL14372_Probes_64735
GPL14372_Probes_64736
GPL14372_Probes_64737
GPL14372_Probes_64738
GPL14372_Probes_64739
GPL14372_Probes_64740
Matching_cDNAFG095897Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_64733
GPL14372_Probes_64734
GPL14372_Probes_64735
GPL14372_Probes_64736
GPL14372_Probes_64737
GPL14372_Probes_64738
GPL14372_Probes_64739
GPL14372_Probes_64740
RNASeq_FPKMWBls:00000323.06655From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010130.7831From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S421-2.159Curator_confirmedWBPerson4055
Methodcurated