WormBase Tree Display for CDS: PPA12832
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PPA12832 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 159 | |||
345 | 470 | |||||
537 | 630 | |||||
1390 | 1487 | |||||
1552 | 1920 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-4.67 | ||
DB_remark | contains similarity to Pfam domain PF01852 (START domain); contains similarity to Interpro domains IPR023393 (START-like domain superfamily), IPR002913 (START domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102386 | ||||
Corresponding_transcript | PPA12832.1 | |||||
Corresponding_protein | PP55664 | |||||
Corresponding_oligo_set | GPL14372_Probes_49076 | |||||
GPL14372_Probes_49077 | ||||||
GPL14372_Probes_49078 | ||||||
GPL14372_Probes_49079 | ||||||
Microarray_results | GPL14372_Probes_49076 | |||||
GPL14372_Probes_49077 | ||||||
GPL14372_Probes_49078 | ||||||
GPL14372_Probes_49079 | ||||||
RNASeq_FPKM | WBls:0000032 | 65.2552 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 65.2238 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-4.67 | Curator_confirmed | WBPerson4055 | |||
Method | curated |