WormBase Tree Display for CDS: PPA12908
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PPA12908 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (47) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-12.21 | ||
DB_remark | PPA-CHE-12 protein; contains similarity to Pfam domain PF12348 (CLASP N terminal); contains similarity to Interpro domains IPR034085 (TOG domain), IPR024395 (CLASP N-terminal domain), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102462 | ||||
Corresponding_transcript | PPA12908.1 | |||||
Corresponding_protein | PP64476 | |||||
Corresponding_oligo_set | GPL14372_Probes_26203 | |||||
GPL14372_Probes_26204 | ||||||
GPL14372_Probes_26205 | ||||||
GPL14372_Probes_81035 | ||||||
Microarray_results | GPL14372_Probes_26203 | |||||
GPL14372_Probes_26204 | ||||||
GPL14372_Probes_26205 | ||||||
GPL14372_Probes_81035 | ||||||
RNASeq_FPKM | WBls:0000032 | 0.788426 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-12.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |