WormBase Tree Display for CDS: PPA13052

PPA13052 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (29)
  DB_info: Database: pristionchus.org cds gene-UMM-S2844-3.9
      TREEFAM TREEFAM_ID TF315800
    DB_remark: PPA-ASP-2.1 protein; contains similarity to Pfam domain PF00026 (Eukaryotic aspartyl protease); contains similarity to Interpro domains IPR001461 (Aspartic peptidase A1 family), IPR021109 (Aspartic peptidase domain superfamily), IPR033121 (Peptidase family A1 domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00102606
    Corresponding_transcript: PPA13052.1
    Corresponding_protein: PP72621
    Corresponding_oligo_set: GPL14372_Probes_40399
      GPL14372_Probes_40400
      GPL14372_Probes_40402
      GPL14372_Probes_40403
      GPL14372_Probes_40404
      GPL14372_Probes_40405
    Matching_cDNA: AW114708 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_40399
      GPL14372_Probes_40400
      GPL14372_Probes_40402
      GPL14372_Probes_40403
      GPL14372_Probes_40404
      GPL14372_Probes_40405
    RNASeq_FPKM: WBls:0000032 3.45903 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 9.19145 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2844-3.9 Curator_confirmed: WBPerson4055
  Method: curated