WormBase Tree Display for CDS: PPA13063
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PPA13063 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (19) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-3.1 | ||
DB_remark | contains similarity to Pfam domain PF00135 (Carboxylesterase family); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR002018 (Carboxylesterase, type B) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00102617 | ||||
Corresponding_transcript | PPA13063.1 | |||||
Corresponding_protein | PP70078 | |||||
Corresponding_oligo_set | GPL14372_Probes_40410 | |||||
GPL14372_Probes_40411 | ||||||
GPL14372_Probes_40412 | ||||||
Matching_cDNA | BI500439 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_40410 | |||||
GPL14372_Probes_40411 | ||||||
GPL14372_Probes_40412 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-3.1 | Curator_confirmed | WBPerson4055 | |||
Method | curated |