WormBase Tree Display for CDS: PPA13301
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PPA13301 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (61) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-54.6 | ||
DB_remark | contains similarity to Pfam domain PF08005 (PHR domain); contains similarity to Interpro domains IPR038648 (PHR domain superfamily), IPR011009 (Protein kinase-like domain superfamily), IPR012983 (PHR) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00102855 | ||||
Corresponding_transcript | PPA13301.1 | |||||
Corresponding_protein | PP60706 | |||||
Corresponding_oligo_set | GPL14372_Probes_25015 | |||||
GPL14372_Probes_78840 | ||||||
Microarray_results | GPL14372_Probes_25015 | |||||
GPL14372_Probes_78840 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.29967 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.6271 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-54.6 | Curator_confirmed | WBPerson4055 | |||
Method | curated |