WormBase Tree Display for CDS: PPA13328
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PPA13328 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 76 | |||
169 | 266 | |||||
817 | 942 | |||||
1086 | 1193 | |||||
1475 | 1585 | |||||
1812 | 1907 | |||||
2088 | 2156 | |||||
2505 | 2583 | |||||
3023 | 3144 | |||||
3225 | 3296 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-55.53 | ||
DB_remark | contains similarity to Pfam domain PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh); contains similarity to Interpro domain IPR019422 (7TM GPCR, serpentine receptor class h (Srh)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102882 | ||||
Corresponding_transcript | PPA13328.1 | |||||
Corresponding_protein | PP57793 | |||||
Corresponding_oligo_set | GPL14372_Probes_25064 | |||||
GPL14372_Probes_25065 | ||||||
GPL14372_Probes_25066 | ||||||
GPL14372_Probes_25067 | ||||||
Microarray_results | GPL14372_Probes_25064 | |||||
GPL14372_Probes_25065 | ||||||
GPL14372_Probes_25066 | ||||||
GPL14372_Probes_25067 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-55.53 | Curator_confirmed | WBPerson4055 | |||
Method | curated |