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WormBase Tree Display for CDS: PPA13368

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Name Class

PPA13368SMapS_parentSequencePPA_ChrII
StructureSource_exons (28)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-57.50
DB_remarkcontains similarity to Pfam domains PF00083 (Sugar (and other) transporter), PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd); contains similarity to Interpro domains IPR036259 (MFS transporter superfamily), IPR005828 (Major facilitator, sugar transporter-like), IPR019421 (7TM GPCR, serpentine receptor class d (Srd))
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00102922
Corresponding_transcriptPPA13368.1
Corresponding_proteinPP58497
Corresponding_oligo_setGPL14372_Probes_25104
GPL14372_Probes_25105
GPL14372_Probes_25106
GPL14372_Probes_25107
GPL14372_Probes_25108
GPL14372_Probes_78917
GPL14372_Probes_78918
Microarray_resultsGPL14372_Probes_25104
GPL14372_Probes_25105
GPL14372_Probes_25106
GPL14372_Probes_25107
GPL14372_Probes_25108
GPL14372_Probes_78917
GPL14372_Probes_78918
RNASeq_FPKMWBls:00000321.27184From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-57.50Curator_confirmedWBPerson4055
Methodcurated