WormBase Tree Display for CDS: PPA13399
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PPA13399 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S41-59.52 | ||
DB_remark | contains similarity to Pfam domain PF13087 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00102953 | ||||
Corresponding_transcript | PPA13399.1 | |||||
Corresponding_protein | PP67048 | |||||
Corresponding_oligo_set | GPL14372_Probes_25128 | |||||
GPL14372_Probes_25130 | ||||||
GPL14372_Probes_25131 | ||||||
Microarray_results | GPL14372_Probes_25128 | |||||
GPL14372_Probes_25130 | ||||||
GPL14372_Probes_25131 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S41-59.52 | Curator_confirmed | WBPerson4055 | |||
Method | curated |