WormBase Tree Display for CDS: PPA13470

PPA13470 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons (47)
  DB_info: Database: pristionchus.org cds gene-UMM-S41-63.13
    DB_remark: contains similarity to Pfam domains PF00002 (7 transmembrane receptor (Secretin family)), PF00059 (Lectin C-type domain), PF01825 (GPCR proteolysis site, GPS, motif), PF02140 (Galactose binding lectin domain), PF16489 (GPCR-Autoproteolysis INducing (GAIN) domain); contains similarity to Interpro domains IPR000832 (GPCR, family 2, secretin-like), IPR043159 (D-galactoside/L-rhamnose binding SUEL lectin domain superfamily), IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR000203 (GPS motif), IPR000922 (D-galactoside/L-rhamnose binding SUEL lectin domain), IPR016187 (C-type lectin fold), IPR032471 (GAIN domain, N-terminal)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00103024
    Corresponding_transcript: PPA13470.1
    Corresponding_protein: PP71355
    Corresponding_oligo_set: GPL14372_Probes_25164
      GPL14372_Probes_25165
      GPL14372_Probes_25166
      GPL14372_Probes_25167
      GPL14372_Probes_79100
      GPL14372_Probes_79101
      GPL14372_Probes_79102
      GPL14372_Probes_79103
    Microarray_results: GPL14372_Probes_25164
      GPL14372_Probes_25165
      GPL14372_Probes_25166
      GPL14372_Probes_25167
      GPL14372_Probes_79100
      GPL14372_Probes_79101
      GPL14372_Probes_79102
      GPL14372_Probes_79103
    RNASeq_FPKM: WBls:0000032 2.60994 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 3.08214 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S41-63.13 Curator_confirmed: WBPerson4055
  Method: curated