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WormBase Tree Display for CDS: PPA13684

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Name Class

PPA13684SMapS_parentSequencePPA_ChrIV
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2852-2.18
TREEFAMTREEFAM_IDTF105811
DB_remarkcontains similarity to Pfam domain PF10343 (Queuosine salvage protein); contains similarity to Interpro domain IPR019438 (Queuosine salvage protein family)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103238
Corresponding_transcriptPPA13684.1
Corresponding_proteinPP63404
Corresponding_oligo_setGPL14372_Probes_60478
GPL14372_Probes_60479
GPL14372_Probes_60480
GPL14372_Probes_60481
Matching_cDNAFG094717Inferred_automaticallytranscript_builder.pl
FG095034Inferred_automaticallytranscript_builder.pl
FG097525Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_60478
GPL14372_Probes_60479
GPL14372_Probes_60480
GPL14372_Probes_60481
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.19009From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2852-2.18Curator_confirmedWBPerson4055
Methodcurated