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WormBase Tree Display for CDS: PPA13935

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Name Class

PPA13935SMapS_parentSequencePPA_ChrI
StructureSource_exons (33)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-22.33
DB_remarkcontains similarity to Pfam domains PF01344 (Kelch motif), PF07707 (BTB And C-terminal Kelch); contains similarity to Interpro domains IPR006652 (Kelch repeat type 1), IPR011705 (BTB/Kelch-associated), IPR015915 (Kelch-type beta propeller)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103489
Corresponding_transcriptPPA13935.1
Corresponding_proteinPP66783
Corresponding_oligo_set (12)
Matching_cDNAFG095041Inferred_automaticallytranscript_builder.pl
FG096933Inferred_automaticallytranscript_builder.pl
Microarray_results (12)
RNASeq_FPKMWBls:00000322.2371From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010135.6656From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-22.33Curator_confirmedWBPerson4055
Methodcurated