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WormBase Tree Display for CDS: PPA13953

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Name Class

PPA13953SMapS_parentSequencePPA_ChrI
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-21.6
DB_remarkPPA-LMD-3 protein; contains similarity to Pfam domains PF01476 (LysM domain), PF07534 (TLD); contains similarity to Interpro domains IPR018392 (LysM domain), IPR006571 (TLDc domain), IPR036779 (LysM domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103507
Corresponding_transcriptPPA13953.1
Corresponding_proteinPP66318
Corresponding_oligo_setGPL14372_Probes_50247
GPL14372_Probes_50248
GPL14372_Probes_6666
GPL14372_Probes_6668
GPL14372_Probes_6670
GPL14372_Probes_6671
GPL14372_Probes_6672
GPL14372_Probes_6673
Matching_cDNAAW114422Inferred_automaticallytranscript_builder.pl
AW097441Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_6666
GPL14372_Probes_6668
GPL14372_Probes_6670
GPL14372_Probes_6671
GPL14372_Probes_6672
GPL14372_Probes_6673
GPL14372_Probes_50247
GPL14372_Probes_50248
RNASeq_FPKMWBls:00000325.26138From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.55337From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-21.6Curator_confirmedWBPerson4055
Methodcurated