WormBase Tree Display for CDS: PPA14016
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PPA14016 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 114 | |||
179 | 281 | |||||
336 | 432 | |||||
481 | 607 | |||||
886 | 1013 | |||||
1060 | 1123 | |||||
1171 | 1275 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S71-18.34 | ||
DB_remark | contains similarity to Pfam domain PF00230 (Major intrinsic protein); contains similarity to Interpro domains IPR023271 (Aquaporin-like), IPR034294 (Aquaporin transporter), IPR000425 (Major intrinsic protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103570 | ||||
Corresponding_transcript | PPA14016.1 | |||||
Corresponding_protein | PP52670 | |||||
Corresponding_oligo_set | GPL14372_Probes_50012 | |||||
GPL14372_Probes_50013 | ||||||
Microarray_results | GPL14372_Probes_50012 | |||||
GPL14372_Probes_50013 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.03215 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S71-18.34 | Curator_confirmed | WBPerson4055 | |||
Method | curated |