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WormBase Tree Display for CDS: PPA14025

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Name Class

PPA14025SMapS_parentSequencePPA_ChrI
StructureSource_exons174
127247
297500
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-19.63
TREEFAMTREEFAM_IDTF105635
DB_remarkcontains similarity to Pfam domain PF13233 (Complex1_LYR-like); contains similarity to Interpro domain IPR008381 (Succinate dehydrogenase assembly factor 3, mitochondrial)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103579
Corresponding_transcriptPPA14025.1
PPA14025.2
Corresponding_proteinPP01009
Corresponding_oligo_setGPL14372_Probes_50057
GPL14372_Probes_50058
GPL14372_Probes_50059
Matching_cDNACN656599Inferred_automaticallytranscript_builder.pl
FG106216Inferred_automaticallytranscript_builder.pl
FG104739Inferred_automaticallytranscript_builder.pl
FG103229Inferred_automaticallytranscript_builder.pl
FG106557Inferred_automaticallytranscript_builder.pl
CO870560Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_50057
GPL14372_Probes_50058
GPL14372_Probes_50059
RNASeq_FPKMWBls:0000032102.852From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010199.432From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-19.63Curator_confirmedWBPerson4055
Methodcurated