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WormBase Tree Display for CDS: PPA14039

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Name Class

PPA14039SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S71-18.13
TREEFAMTREEFAM_IDTF317750
DB_remarkcontains similarity to Pfam domain PF05046 (Mitochondrial large subunit ribosomal protein (Img2)); contains similarity to Interpro domains IPR011011 (Zinc finger, FYVE/PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR007740 (Large ribosomal subunit protein mL49), IPR040043 (Actin maturation protease)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103593
Corresponding_transcriptPPA14039.1
Corresponding_proteinPP60083
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:000003256.2937From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010155.4015From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S71-18.13Curator_confirmedWBPerson4055
Methodcurated