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WormBase Tree Display for CDS: PPA14041

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Name Class

PPA14041SMapS_parentSequencePPA_ChrI
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S71-18.4
TREEFAMTREEFAM_IDTF105121
DB_remarkPPA-GCK-2 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF00780 (CNH domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain), IPR001180 (Citron homology (CNH) domain), IPR021160 (Mitogen-activated protein (MAP) kinase kinase kinase kinase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103595
Corresponding_transcriptPPA14041.1
Corresponding_proteinPP58603
Corresponding_oligo_setGPL14372_Probes_49959
GPL14372_Probes_49960
GPL14372_Probes_49961
GPL14372_Probes_49962
Matching_cDNAAW052266Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_49959
GPL14372_Probes_49960
GPL14372_Probes_49961
GPL14372_Probes_49962
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S71-18.4Curator_confirmedWBPerson4055
Methodcurated