WormBase Tree Display for CDS: PPA14077
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PPA14077 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (51) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-16.0 | ||
DB_remark | contains similarity to Pfam domains PF00067 (Cytochrome P450), PF00135 (Carboxylesterase family); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR029058 (Alpha/Beta hydrolase fold), IPR002018 (Carboxylesterase, type B), IPR036396 (Cytochrome P450 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00103631 | ||||
Corresponding_transcript | PPA14077.1 | |||||
Corresponding_protein | PP67811 | |||||
Corresponding_oligo_set (12) | ||||||
Matching_cDNA | FG099380 | Inferred_automatically | transcript_builder.pl | |||
BQ088030 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results (12) | ||||||
RNASeq_FPKM | WBls:0000032 | 6.9705 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 4.93894 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-16.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |