WormBase Tree Display for CDS: PPA14092
expand all nodes | collapse all nodes | view schema
PPA14092 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-15.84 | ||
DB_remark | contains similarity to Pfam domain PF01826 (Trypsin Inhibitor like cysteine rich domain); contains similarity to Interpro domains IPR010601 (Protein of unknown function DUF1182), IPR002919 (Trypsin Inhibitor-like, cysteine rich domain), IPR036084 (Serine protease inhibitor-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00103646 | ||||
Corresponding_transcript | PPA14092.1 | |||||
Corresponding_protein | PP52958 | |||||
Corresponding_oligo_set | GPL14372_Probes_49730 | |||||
GPL14372_Probes_49731 | ||||||
GPL14372_Probes_49732 | ||||||
Microarray_results | GPL14372_Probes_49730 | |||||
GPL14372_Probes_49731 | ||||||
GPL14372_Probes_49732 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.92172 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.4508 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-15.84 | Curator_confirmed | WBPerson4055 | |||
Method | curated |