WormBase Tree Display for CDS: PPA14098
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PPA14098 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-15.82 | ||
DB_remark | PPA-NCX-5 protein; contains similarity to Pfam domain PF01699 (Sodium/calcium exchanger protein); contains similarity to Interpro domains IPR030243 (), IPR004481 (Sodium/potassium/calcium exchanger), IPR004837 (Sodium/calcium exchanger membrane region) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103652 | ||||
Corresponding_transcript | PPA14098.1 | |||||
Corresponding_protein | PP66385 | |||||
Corresponding_oligo_set | GPL14372_Probes_49705 | |||||
GPL14372_Probes_49706 | ||||||
GPL14372_Probes_49707 | ||||||
GPL14372_Probes_49708 | ||||||
GPL14372_Probes_6593 | ||||||
Microarray_results | GPL14372_Probes_6593 | |||||
GPL14372_Probes_49705 | ||||||
GPL14372_Probes_49706 | ||||||
GPL14372_Probes_49707 | ||||||
GPL14372_Probes_49708 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.53281 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-15.82 | Curator_confirmed | WBPerson4055 | |||
Method | curated |