WormBase Tree Display for CDS: PPA14110
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PPA14110 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 239 | 281 | |||
326 | 420 | |||||
465 | 548 | |||||
593 | 701 | |||||
748 | 806 | |||||
850 | 979 | |||||
1029 | 1102 | |||||
1191 | 1265 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-14.77 | ||
TREEFAM | TREEFAM_ID | TF315133 | ||||
DB_remark | PPA-MPST-1 protein; contains similarity to Pfam domain PF15795 (Ectodermal ciliogenesis protein); contains similarity to Interpro domain IPR026673 (SPEC3/Stum) | |||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103664 | ||||
Corresponding_transcript | PPA14110.1 | |||||
Corresponding_protein | PP75065 | |||||
Corresponding_oligo_set | GPL14372_Probes_49682 | |||||
GPL14372_Probes_49683 | ||||||
GPL14372_Probes_49684 | ||||||
GPL14372_Probes_49685 | ||||||
Microarray_results | GPL14372_Probes_49682 | |||||
GPL14372_Probes_49683 | ||||||
GPL14372_Probes_49684 | ||||||
GPL14372_Probes_49685 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 22 Jul 2019 16:50:50 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S71-14.77 | Curator_confirmed | WBPerson4055 | |||
[190722 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |