WormBase Tree Display for CDS: PPA14127
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PPA14127 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 128 | |||
206 | 275 | |||||
399 | 566 | |||||
661 | 711 | |||||
876 | 941 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-0.7 | ||
TREEFAM | TREEFAM_ID | TF319527 | ||||
DB_remark | contains similarity to Pfam domain PF05347 (Complex 1 protein (LYR family)); contains similarity to Interpro domain IPR008011 (Complex 1 LYR protein domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103681 | ||||
Corresponding_transcript | PPA14127.1 | |||||
Corresponding_protein | PP51252 | |||||
Corresponding_oligo_set | GPL14372_Probes_57750 | |||||
Microarray_results | GPL14372_Probes_57750 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-0.7 | Curator_confirmed | WBPerson4055 | |||
Method | curated |