Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA14133

expand all nodes | collapse all nodes | view schema

Name Class

PPA14133SMapS_parentSequencePPA_ChrI
StructureSource_exons (21)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-13.31
TREEFAMTREEFAM_IDTF300842
DB_remarkPPA-PAP-1 protein; contains similarity to Pfam domains PF01909 (Nucleotidyltransferase domain), PF04926 (Poly(A) polymerase predicted RNA binding domain), PF04928 (Poly(A) polymerase central domain); contains similarity to Interpro domains IPR007012 (Poly(A) polymerase, central domain), IPR007010 (Poly(A) polymerase, RNA-binding domain), IPR014492 (Poly(A) polymerase), IPR011068 (Nucleotidyltransferase, class I-like, C-terminal), IPR002934 (Polymerase, nucleotidyl transferase domain), IPR043519 (Nucleotidyltransferase superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00103687
Corresponding_transcriptPPA14133.1
Corresponding_proteinPP72224
Corresponding_oligo_setGPL14372_Probes_49613
GPL14372_Probes_49614
GPL14372_Probes_49615
GPL14372_Probes_49616
Microarray_resultsGPL14372_Probes_49613
GPL14372_Probes_49614
GPL14372_Probes_49615
GPL14372_Probes_49616
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.21754From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-13.31Curator_confirmedWBPerson4055
Methodcurated