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WormBase Tree Display for CDS: PPA14138

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Name Class

PPA14138SMapS_parentSequencePPA_ChrI
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S71-13.37
TREEFAMTREEFAM_IDTF312922
DB_remarkcontains similarity to Pfam domain PF02995 (Protein of unknown function (DUF229)); contains similarity to Interpro domains IPR004245 (Protein of unknown function DUF229), IPR017850 (Alkaline-phosphatase-like, core domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00103692
Corresponding_transcriptPPA14138.1
Corresponding_proteinPP63168
Corresponding_oligo_setGPL14372_Probes_49594
GPL14372_Probes_49595
GPL14372_Probes_49596
GPL14372_Probes_49597
Matching_cDNAAI989214Inferred_automaticallytranscript_builder.pl
EB183072Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_49594
GPL14372_Probes_49595
GPL14372_Probes_49596
GPL14372_Probes_49597
RNASeq_FPKMWBls:00000329.82354From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010118.2306From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S71-13.37Curator_confirmedWBPerson4055
Methodcurated