WormBase Tree Display for CDS: PPA14189
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| PPA14189 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (12) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMS-S71-11.39 | ||
| DB_remark | PPA-ODR-3 protein; contains similarity to Pfam domain PF00503 (G-protein alpha subunit); contains similarity to Interpro domains IPR011025 (G protein alpha subunit, helical insertion), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00103743 | ||||
| Corresponding_transcript | PPA14189.1 | |||||
| Corresponding_protein | PP16197 | |||||
| Corresponding_oligo_set | GPL14372_Probes_6502 | |||||
| GPL14372_Probes_6503 | ||||||
| GPL14372_Probes_6504 | ||||||
| GPL14372_Probes_6505 | ||||||
| GPL14372_Probes_6506 | ||||||
| Microarray_results | GPL14372_Probes_6502 | |||||
| GPL14372_Probes_6503 | ||||||
| GPL14372_Probes_6504 | ||||||
| GPL14372_Probes_6505 | ||||||
| GPL14372_Probes_6506 | ||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMS-S71-11.39 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
