WormBase Tree Display for CDS: PPA14205
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PPA14205 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-10.62 | ||
TREEFAM | TREEFAM_ID | TF343247 | ||||
DB_remark | PPA-MPZ-5 protein; contains similarity to Pfam domain PF00595 (PDZ domain); contains similarity to Interpro domains IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR040264 (Uncharacterized protein T15H9.4-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103759 | ||||
Corresponding_transcript | PPA14205.1 | |||||
Corresponding_protein | PP34974 | |||||
Corresponding_oligo_set | GPL14372_Probes_49383 | |||||
GPL14372_Probes_49384 | ||||||
GPL14372_Probes_49385 | ||||||
GPL14372_Probes_49386 | ||||||
GPL14372_Probes_49387 | ||||||
Microarray_results | GPL14372_Probes_49383 | |||||
GPL14372_Probes_49384 | ||||||
GPL14372_Probes_49385 | ||||||
GPL14372_Probes_49386 | ||||||
GPL14372_Probes_49387 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.0735 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-10.62 | Curator_confirmed | WBPerson4055 | |||
Method | curated |