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WormBase Tree Display for CDS: PPA14211

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Name Class

PPA14211SMapS_parentSequencePPA_ChrI
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-9.38
TREEFAMTREEFAM_IDTF300603
DB_remarkPPA-ASNS-1 protein; contains similarity to Pfam domains PF00733 (Asparagine synthase), PF13537 (Glutamine amidotransferase domain); contains similarity to Interpro domains IPR001962 (Asparagine synthase), IPR029055 (Nucleophile aminohydrolases, N-terminal), IPR017932 (Glutamine amidotransferase type 2 domain), IPR006426 (Asparagine synthase, glutamine-hydrolyzing), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00103765
Corresponding_transcriptPPA14211.1
Corresponding_proteinPP13661
Corresponding_oligo_setGPL14372_Probes_49375
GPL14372_Probes_49376
Microarray_resultsGPL14372_Probes_49375
GPL14372_Probes_49376
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-9.38Curator_confirmedWBPerson4055
Methodcurated