WormBase Tree Display for CDS: PPA14253
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PPA14253 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S71-8.47 | ||
TREEFAM | TREEFAM_ID | TF315037 | ||||
DB_remark | PPA-AOS-1 protein; contains similarity to Pfam domain PF13622 (Acyl-CoA thioesterase N-terminal domain); contains similarity to Interpro domains IPR003703 (Acyl-CoA thioesterase), IPR029069 (HotDog domain superfamily), IPR042171 (Acyl-CoA thioesterase, double hotdog domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103807 | ||||
Corresponding_transcript | PPA14253.1 | |||||
Corresponding_protein | PP55003 | |||||
Corresponding_oligo_set | GPL14372_Probes_49260 | |||||
GPL14372_Probes_49261 | ||||||
GPL14372_Probes_49262 | ||||||
GPL14372_Probes_49264 | ||||||
GPL14372_Probes_49266 | ||||||
Microarray_results | GPL14372_Probes_49260 | |||||
GPL14372_Probes_49261 | ||||||
GPL14372_Probes_49262 | ||||||
GPL14372_Probes_49264 | ||||||
GPL14372_Probes_49266 | ||||||
RNASeq_FPKM | WBls:0000032 | 15.5197 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 9.16563 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S71-8.47 | Curator_confirmed | WBPerson4055 | |||
Method | curated |