WormBase Tree Display for CDS: PPA14356
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PPA14356 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 134 | |||
189 | 284 | |||||
333 | 463 | |||||
513 | 610 | |||||
653 | 757 | |||||
841 | 969 | |||||
1014 | 1058 | |||||
1104 | 1166 | |||||
1241 | 1330 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-17.21 | ||
DB_remark | PPA-DNA-2 protein; contains similarity to Pfam domain PF13087 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00103910 | ||||
Corresponding_transcript | PPA14356.1 | |||||
Corresponding_protein | PP68518 | |||||
Corresponding_oligo_set | GPL14372_Probes_17545 | |||||
GPL14372_Probes_17546 | ||||||
Microarray_results | GPL14372_Probes_17545 | |||||
GPL14372_Probes_17546 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S245-17.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |