WormBase Tree Display for CDS: PPA14362
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| PPA14362 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (14) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S245-17.36 | ||
| TREEFAM | TREEFAM_ID | TF106143 | ||||
| DB_remark | PPA-MBOA-6 protein; contains similarity to Pfam domain PF03062 (MBOAT, membrane-bound O-acyltransferase family); contains similarity to Interpro domain IPR004299 (Membrane bound O-acyl transferase, MBOAT) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00103916 | ||||
| Corresponding_transcript | PPA14362.1 | |||||
| Corresponding_protein | PP70943 | |||||
| Corresponding_oligo_set | GPL14372_Probes_68167 | |||||
| GPL14372_Probes_68168 | ||||||
| GPL14372_Probes_68169 | ||||||
| GPL14372_Probes_68170 | ||||||
| GPL14372_Probes_68171 | ||||||
| GPL14372_Probes_68172 | ||||||
| GPL14372_Probes_68173 | ||||||
| GPL14372_Probes_68174 | ||||||
| GPL14372_Probes_68175 | ||||||
| Matching_cDNA | FG104717 | Inferred_automatically | transcript_builder.pl | |||
| FG094939 | Inferred_automatically | transcript_builder.pl | ||||
| FG096540 | Inferred_automatically | transcript_builder.pl | ||||
| FG101183 | Inferred_automatically | transcript_builder.pl | ||||
| FG106334 | Inferred_automatically | transcript_builder.pl | ||||
| Microarray_results | GPL14372_Probes_68167 | |||||
| GPL14372_Probes_68168 | ||||||
| GPL14372_Probes_68169 | ||||||
| GPL14372_Probes_68170 | ||||||
| GPL14372_Probes_68171 | ||||||
| GPL14372_Probes_68172 | ||||||
| GPL14372_Probes_68173 | ||||||
| GPL14372_Probes_68174 | ||||||
| GPL14372_Probes_68175 | ||||||
| RNASeq_FPKM | WBls:0000032 | 13.0187 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 21.5262 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S245-17.36 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
