WormBase Tree Display for CDS: PPA14679
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PPA14679 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 40 | |||
313 | 400 | |||||
1057 | 1133 | |||||
1834 | 1945 | |||||
2459 | 2585 | |||||
2817 | 2897 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-31.51 | ||
TREEFAM | TREEFAM_ID | TF315142 | ||||
DB_remark | contains similarity to Pfam domain PF04145 (Ctr copper transporter family); contains similarity to Interpro domain IPR007274 (Ctr copper transporter) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00104233 | ||||
Corresponding_transcript | PPA14679.1 | |||||
Corresponding_protein | PP57708 | |||||
Corresponding_oligo_set | GPL14372_Probes_70604 | |||||
GPL14372_Probes_70605 | ||||||
GPL14372_Probes_70606 | ||||||
Microarray_results | GPL14372_Probes_70604 | |||||
GPL14372_Probes_70605 | ||||||
GPL14372_Probes_70606 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-31.51 | Curator_confirmed | WBPerson4055 | |||
Method | curated |