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WormBase Tree Display for CDS: PPA14788

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Name Class

PPA14788SMapS_parentSequencePPA_ChrII
StructureSource_exons160
190285
686780
11311196
15521675
30533125
37103782
45054613
DB_infoDatabasepristionchus.orgcdsgene-UMA-S41-26.6
DB_remarkPPA-RAB-39 protein; contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00104342
Corresponding_transcriptPPA14788.1
Corresponding_proteinPP41051
Corresponding_oligo_setGPL14372_Probes_70486
Matching_cDNAAI987033Inferred_automaticallytranscript_builder.pl
AW052517Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_70486
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S41-26.6Curator_confirmedWBPerson4055
Methodcurated