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WormBase Tree Display for CDS: PPA14908

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Name Class

PPA14908SMapS_parentSequencePPA_ChrI
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-9.57
TREEFAMTREEFAM_IDTF317212
DB_remarkcontains similarity to Pfam domain PF00999 (Sodium/hydrogen exchanger family); contains similarity to Interpro domains IPR018422 (Cation/H+ exchanger, CPA1 family), IPR006153 (Cation/H+ exchanger), IPR004709 (Na+/H+ exchanger)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00104462
Corresponding_transcriptPPA14908.1
Corresponding_proteinPP70466
Corresponding_oligo_setGPL14372_Probes_17857
GPL14372_Probes_17858
GPL14372_Probes_17859
GPL14372_Probes_68677
GPL14372_Probes_68678
GPL14372_Probes_68679
GPL14372_Probes_68680
GPL14372_Probes_68682
Microarray_resultsGPL14372_Probes_17857
GPL14372_Probes_17858
GPL14372_Probes_17859
GPL14372_Probes_68677
GPL14372_Probes_68678
GPL14372_Probes_68679
GPL14372_Probes_68680
GPL14372_Probes_68682
RNASeq_FPKMWBls:00000321.72122From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.262From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-9.57Curator_confirmedWBPerson4055
Methodcurated