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WormBase Tree Display for CDS: PPA15513

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Name Class

PPA15513SMapS_parentSequencePPA_ChrIV
StructureSource_exons156
214341
565633
841904
11451235
13631435
18231911
20722122
22032314
24392509
DB_infoDatabasepristionchus.orgcdsgene-UMS-S2840-24.14
DB_remarkcontains similarity to Pfam domain PF00089 (Trypsin); contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin family), IPR043504 (Peptidase S1, PA clan, chymotrypsin-like fold), IPR001254 (Serine proteases, trypsin domain), IPR009003 (Peptidase S1, PA clan)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00105067
Corresponding_transcriptPPA15513.1
Corresponding_proteinPP60792
Corresponding_oligo_setGPL14372_Probes_58248
GPL14372_Probes_58249
GPL14372_Probes_58250
Microarray_resultsGPL14372_Probes_58248
GPL14372_Probes_58249
GPL14372_Probes_58250
RNASeq_FPKMWBls:000003216.1105From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S2840-24.14Curator_confirmedWBPerson4055
Methodcurated