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WormBase Tree Display for CDS: PPA15516

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Name Class

PPA15516SMapS_parentSequencePPA_ChrIV
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-24.26
DB_remarkcontains similarity to Pfam domains PF02520 (SXP/RAL-2 family protein Ani s 5-like, metal-binding domain), PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri); contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR003677 (SXP/RAL-2 family protein Ani s 5-like, cation-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00105070
Corresponding_transcriptPPA15516.1
Corresponding_proteinPP69229
Corresponding_oligo_setGPL14372_Probes_20534
GPL14372_Probes_77681
GPL14372_Probes_77682
GPL14372_Probes_77684
Microarray_resultsGPL14372_Probes_20534
GPL14372_Probes_77681
GPL14372_Probes_77682
GPL14372_Probes_77684
RNASeq_FPKMWBls:00000324.41696From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-24.26Curator_confirmedWBPerson4055
Methodcurated