WormBase Tree Display for CDS: PPA16028

PPA16028 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons: 1 75
      118 264
      308 451
      1418 1519
      1591 1695
      1743 1921
      2089 2224
      2528 2617
  DB_info: Database: pristionchus.org cds gene-UMM-S576-0.50
      TREEFAM TREEFAM_ID TF300029
    DB_remark: PPA-RER-1 protein; contains similarity to Pfam domain PF03248 (Rer1 family); contains similarity to Interpro domain IPR004932 (Retrieval of early ER protein Rer1)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00105582
    Corresponding_transcript: PPA16028.1
    Corresponding_protein: PP54887
    Corresponding_oligo_set: GPL14372_Probes_15925
      GPL14372_Probes_15926
      GPL14372_Probes_15927
    Matching_cDNA: FG100325 Inferred_automatically: transcript_builder.pl
      FG097511 Inferred_automatically: transcript_builder.pl
      FE934782 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_15925
      GPL14372_Probes_15926
      GPL14372_Probes_15927
    RNASeq_FPKM: WBls:0000032 17.7181 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 20.9275 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S576-0.50 Curator_confirmed: WBPerson4055
  Method: curated