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WormBase Tree Display for CDS: PPA16150

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Name Class

PPA16150SMapS_parentSequencePPA_ChrII
StructureSource_exons1129
331426
476565
629724
DB_infoDatabasepristionchus.orgcdsgene-UMM-S273-8.63
DB_remarkPPA-LRON-12.2 protein; contains similarity to Pfam domain PF18121 (TFA2 Winged helix domain 2); contains similarity to Interpro domains IPR036390 (Winged helix DNA-binding domain superfamily), IPR016656 (Transcription initiation factor TFIIE, beta subunit), IPR040501 (TFA2, Winged helix domain 2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00105704
Corresponding_transcriptPPA16150.1
Corresponding_proteinPP68016
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S273-8.63Curator_confirmedWBPerson4055
Methodcurated